Description

U1 snRNP splicing complex subunit (Luc7) [Source:VB External Description;Acc:AGAP008314]

Location
About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 8 variations and maps to 3 oligo probes.

Gene

This transcript is a product of gene AGAP008314 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP008314-RB1482296aaAGAP008314-PB
 
Protein coding
A0A1S4GXX4 -
NovelAGAP008314-RA1352349aaAGAP008314-PA
 
Protein coding
A0A1S4GXX5 Q7PJ85 XM_001688951.1
XM_317153.4
XP_317153.4
NovelAGAP008314-RC66088aaAGAP008314-PC
 
Protein coding
A0A1S4GYL5 XM_001688951.1
XM_317153.4
Statistics

Exons: 3, Coding exons: 3, Transcript length: 660 bps, Translation length: 88 residues

Version

AGAP008314-RC.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays