Description

spaetzle-like cytokine [Source:VB Community Annotation;Acc:AGAP008360]

Location
About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 27 variations and maps to 33 oligo probes.

Gene

This transcript is a product of gene AGAP008360 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
SPZ3AGAP008360-RA2429579aaAGAP008360-PA
 
Protein coding
A0A1S4GY14 A0NF22 B2FXS0
B2FXS5 B2FXS6 B2FXS7
B2FXS8 B2FXS9 B2FXT0
B2FXT3 Q7Q4E6
XM_001237883.1
XM_317093.4
XP_001237884.1
XP_317093.3
Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,429 bps, Translation length: 579 residues

Version

AGAP008360-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays