Description

cyclic AMP-dependent transcription factor ATF-2 [Source:VB External Description;Acc:AGAP008416]

Location
About this transcript

This transcript has 2 exons, is annotated with 11 domains and features, is associated with 48 variations and maps to 11 oligo probes.

Gene

This transcript is a product of gene AGAP008416 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP008416-RA2107503aaAGAP008416-PA
 
Protein coding
A0A1S4GYW6 A7UUL4 XM_001688946.1
XP_001688998.1
Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,107 bps, Translation length: 503 residues

Version

AGAP008416-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays