Description

aquaporin (AQP1) [Source:VB Community Annotation;Acc:AGAP008843]

Location
About this transcript

This transcript has 6 exons, is annotated with 22 domains and features, is associated with 18 variations and maps to 21 oligo probes.

Gene

This transcript is a product of gene AGAP008843 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
AQP1AGAP008843-RB1281259aaAGAP008843-PB
 
Protein coding
D1MYR4 XM_319585.4
AQP1AGAP008843-RA1148266aaAGAP008843-PA
 
Protein coding
F2YNF6 Q7PWV0 XM_319585.4
XP_319585.4
Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,281 bps, Translation length: 259 residues

Version

AGAP008843-RB.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays