Description

CAP-Gly domain-containing linker protein 1 [Source:VB External Description;Acc:AGAP009210]

Location
About this transcript

This transcript has 12 exons, is annotated with 69 domains and features, is associated with 174 variations and maps to 33 oligo probes.

Gene

This transcript is a product of gene AGAP009210 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP009210-RA58151874aaAGAP009210-PA
 
Protein coding
A0A1S4H0G4 Q7PVQ7 XM_319987.4
XP_319987.4
NovelAGAP009210-RB57451747aaAGAP009210-PB
 
Protein coding
A0A1S4H0G6 -
NovelAGAP009210-RD2113499aaAGAP009210-PD
 
Protein coding
A0A1S4H169 -
NovelAGAP009210-RF877264aaAGAP009210-PF
 
Protein coding
A0A1S4H180 -
Statistics

Exons: 12, Coding exons: 11, Transcript length: 5,745 bps, Translation length: 1,747 residues

Version

AGAP009210-RB.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays