Location
About this transcript

This transcript has 14 exons, is annotated with 45 domains and features, is associated with 168 variations and maps to 58 oligo probes.

Gene

This transcript is a product of gene AGAP009424 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP009424-RD59101969aaAGAP009424-PD
 
Protein coding
A0A1S4H1T7 A0NC65 Q7QGA4
XM_001230711.1
XM_307835.4
XM_310102.4
NovelAGAP009424-RB56311876aaAGAP009424-PB
 
Protein coding
A0A1S4H132 Q7PTN5 -
NovelAGAP009424-RA45981430aaAGAP009424-PA
 
Protein coding
A0A1S4H135 -
Statistics

Exons: 14, Coding exons: 14, Transcript length: 5,631 bps, Translation length: 1,876 residues

Version

AGAP009424-RB.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays