Description

nicotinic acetylcholine receptor subunit alpha 9 [Source:VB Community Annotation;Acc:AGAP009493]

Location
About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 29 variations and maps to 24 oligo probes.

Gene

This transcript is a product of gene AGAP009493 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
alpha9AGAP009493-RA1221406aaAGAP009493-PA
 
Protein coding
D2DF16 D2DF17 Q7PSA8
XM_310203.3
XP_310203.3
Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,221 bps, Translation length: 406 residues

Version

AGAP009493-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays