Location
About this transcript

This transcript has 11 exons, is annotated with 18 domains and features, is associated with 31 variations and maps to 48 oligo probes.

Gene

This transcript is a product of gene AGAP009496 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP009496-RA2070604aaAGAP009496-PA
 
Protein coding
A0A1S4H222 Q7PSB0 XM_310199.5
XP_310199.4
Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,070 bps, Translation length: 604 residues

Version

AGAP009496-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Frameshift introns

Frameshift introns occur at intron number(s) 2.

Transcript-based displays