Description

carnitine O-palmitoyltransferase 1 [Source:VB External Description;Acc:AGAP010164]

Location
About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 25 variations and maps to 38 oligo probes.

Gene

This transcript is a product of gene AGAP010164 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP010164-RB3819788aaAGAP010164-PB
 
Protein coding
Q7Q0U0 XM_319334.4
XM_319335.4
XP_319335.3
NovelAGAP010164-RA3687787aaAGAP010164-PA
 
Protein coding
A0A1S4H375 XM_319335.4
NovelAGAP010164-RC3687787aaAGAP010164-PC
 
Protein coding
A0A1S4H375 XM_319335.4
Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,819 bps, Translation length: 788 residues

Version

AGAP010164-RB.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays