Description

echinoid [Source:VB External Description;Acc:AGAP010184]

Location
About this transcript

This transcript has 7 exons, is annotated with 74 domains and features, is associated with 80 variations and maps to 44 oligo probes.

Gene

This transcript is a product of gene AGAP010184 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtFlags
NovelAGAP010184-RA37771258aaAGAP010184-PA
 
Protein coding
A0A1S4H462 Q5TNV1 Q7Q0S7
Statistics

Exons: 7, Coding exons: 7, Transcript length: 3,777 bps, Translation length: 1,258 residues

Version

AGAP010184-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays