Description

copper-zinc (Cu-Zn) superoxide dismutase [Source:VB Community Annotation;Acc:AGAP010347]

Synonyms

SOD3

Location
About this transcript

This transcript has 2 exons, is annotated with 12 domains and features, is associated with 2 variations and maps to 73 oligo probes.

Gene

This transcript is a product of gene AGAP010347 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
CUSOD3AGAP010347-RA841153aaAGAP010347-PA
 
Protein coding
Q5XNS4 Q7QDP9 XM_001230819.2
XM_311594.2
XP_311594.2
CUSOD3AGAP010347-RB659164aaAGAP010347-PB
 
Protein coding
A0NCW9 Q5XNS3 XM_001230819.2
XM_311593.4
XM_311594.2
XP_001230820.1
Statistics

Exons: 2, Coding exons: 2, Transcript length: 841 bps, Translation length: 153 residues

Version

AGAP010347-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays