Description

Tetratricopeptide repeat protein 39B [Source:VB External Description;Acc:AGAP010417]

Location
About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 33 variations and maps to 20 oligo probes.

Gene

This transcript is a product of gene AGAP010417 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP010417-RA2127605aaAGAP010417-PA
 
Protein coding
Q7PRG5 XM_311530.4
XP_311530.4
Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,127 bps, Translation length: 605 residues

Version

AGAP010417-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays