Location
About this transcript

This transcript has 4 exons, is annotated with 24 domains and features, is associated with 17 variations and maps to 21 oligo probes.

Gene

This transcript is a product of gene AGAP010516 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP010516-RA2143590aaAGAP010516-PA
 
Protein coding
A0A1S4H530 Q5TSD6 XM_314488.4
XM_558051.3
XP_558051.3
Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,143 bps, Translation length: 590 residues

Version

AGAP010516-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays