Description

calpain-7 [Source:VB External Description;Acc:AGAP010834]

Location
About this transcript

This transcript has 4 exons, is annotated with 24 domains and features, is associated with 45 variations and maps to 22 oligo probes.

Gene

This transcript is a product of gene AGAP010834 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP010834-RA2166721aaAGAP010834-PA
 
Protein coding
E9JZW5 E9JZX9 E9JZZ4
E9K035 E9K037 E9K040
E9K046 Q7QGN5
XM_309874.4
XP_309874.4
Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,166 bps, Translation length: 721 residues

Version

AGAP010834-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays