Description

Hermansky-Pudlak syndrome 1 protein-like protein [Source:VB External Description;Acc:AGAP011210]

Location
About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature, is associated with 46 variations and maps to 19 oligo probes.

Gene

This transcript is a product of gene AGAP011210 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP011210-RA1845614aaAGAP011210-PA
 
Protein coding
A7US34 XM_001688138.1
XP_001688190.1
Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,845 bps, Translation length: 614 residues

Version

AGAP011210-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays