Description

optic atrophy protein 1 [Source:VB External Description;Acc:AGAP011286]

Location
About this transcript

This transcript has 8 exons, is annotated with 16 domains and features, is associated with 70 variations and maps to 42 oligo probes.

Gene

This transcript is a product of gene AGAP011286 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP011286-RA3149879aaAGAP011286-PA
 
Protein coding
Q7QHP4 XM_309360.4
XP_309360.3
Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,149 bps, Translation length: 879 residues

Version

AGAP011286-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays