Description

GABA-gated chloride channel [Source:VB External Description;Acc:AGAP011349]

Location
About this transcript

This transcript has 9 exons, is annotated with 30 domains and features, is associated with 29 variations and maps to 20 oligo probes.

Gene

This transcript is a product of gene AGAP011349 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP011349-RA1740579aaAGAP011349-PA
 
Protein coding
Q7PST8 XM_309302.5
XP_309302.4
Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,740 bps, Translation length: 579 residues

Version

AGAP011349-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Frameshift introns

Frameshift introns occur at intron number(s) 6.

Transcript-based displays