Description

protein-tyrosine phosphatase [Source:VB External Description;Acc:AGAP011650]

Location
About this transcript

This transcript has 6 exons, is annotated with 41 domains and features, is associated with 83 variations and maps to 19 oligo probes.

Gene

This transcript is a product of gene AGAP011650 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP011650-RA33361111aaAGAP011650-PA
 
Protein coding
Q7PYY8 XM_320862.4
XP_320862.4
Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,336 bps, Translation length: 1,111 residues

Version

AGAP011650-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays