Description

short caspase (CASPS2) [Source:VB Community Annotation;Acc:AGAP011950]

Location
About this transcript

This transcript has 1 exon, is annotated with 16 domains and features, is associated with 10 variations and maps to 32 oligo probes.

Gene

This transcript is a product of gene AGAP011950 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
CASPS2AGAP011950-RA762253aaAGAP011950-PA
 
Protein coding
B2FZJ7 B2FZJ8 B2FZJ9
B2FZK1 B2FZK4 B2FZK6
B2FZK7 B2FZL0 B2FZL3
Q7PZJ9
XM_320581.4
XM_320582.1
XP_320582.1
Statistics

Exons: 1, Coding exons: 1, Transcript length: 762 bps, Translation length: 253 residues

Version

AGAP011950-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays