Description

39S ribosomal protein L21, mitochondrial [Source:VB Community Annotation;Acc:AGAP012030]

Location
About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 10 variations and maps to 26 oligo probes.

Gene

This transcript is a product of gene AGAP012030 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
mRpL21AGAP012030-RA877198aaAGAP012030-PA
 
Protein coding
Q5TMZ0 XM_001689213.1
XM_001689214.1
XM_552180.2
XP_001689265.1
XP_001689266.1
XP_552180.1
mRpL21AGAP012030-RB821198aaAGAP012030-PB
 
Protein coding
Q5TMZ0 XM_001689213.1
XM_001689214.1
XM_552180.2
XP_001689265.1
XP_001689266.1
XP_552180.1
mRpL21AGAP012030-RC801198aaAGAP012030-PC
 
Protein coding
Q5TMZ0 XM_001689213.1
XM_001689214.1
XM_552180.2
XP_001689265.1
XP_001689266.1
XP_552180.1
Statistics

Exons: 4, Coding exons: 2, Transcript length: 821 bps, Translation length: 198 residues

Version

AGAP012030-RB.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays