Location
About this transcript

This transcript has 11 exons, is annotated with 53 domains and features, is associated with 181 variations and maps to 23 oligo probes.

Gene

This transcript is a product of gene AGAP012236 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP012236-RA61982066aaAGAP012236-PA
 
Protein coding
A0A1S4H9N6 A7UVD1 XM_001689196.1
XP_001689248.1
Statistics

Exons: 11, Coding exons: 11, Transcript length: 6,198 bps, Translation length: 2,066 residues

Version

AGAP012236-RA.

Type

Protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays