About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 4 variations and maps to 21 oligo probes.

Gene

This transcript is a product of gene AGAP012666 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeFlags
NovelAGAP012666-RA1072196aaAGAP012666-PA
 
Protein coding
Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,072 bps, Translation length: 196 residues

Version

AGAP012666-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays