About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 11 variations and maps to 9 oligo probes.

Gene

This transcript is a product of gene AGAP012876 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
NovelAGAP012876-RA429142aaAGAP012876-PA
 
Protein coding
Q5TYG9 XM_561508.5
XP_561508.5
Statistics

Exons: 3, Coding exons: 3, Transcript length: 429 bps, Translation length: 142 residues

Version

AGAP012876-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Frameshift introns

Frameshift introns occur at intron number(s) 1, 2.

Transcript-based displays