Description

leucine-rich immune protein (TM) [Source:VB Community Annotation;Acc:AGAP028064]

Location
About this transcript

This transcript has 2 exons, is annotated with 33 domains and features, is associated with 38 variations and maps to 34 oligo probes.

Gene

This transcript is a product of gene AGAP028064 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
LRIM16BAGAP028064-RA2124707aaAGAP028064-PA
 
Protein coding
A0A1S4HE44 Q7PNF9 XM_317759.4
Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,124 bps, Translation length: 707 residues

Version

AGAP028064-RA.

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays