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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
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- Gene history

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Gene: LOC408343

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Description

potassium voltage-gated channel protein Shaker, transcript variant X3

Location

Primary_assembly CM009941.2: 2,936,166-3,249,803 forward strand.

Amel_HAv3.1:CM009941.2

About this gene

This gene has 15 transcripts (splice variants), 90 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_016914894	3857	560aa	XP_016770383	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AU61	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_016914899	5407	512aa	XP_016770388	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006560629	5350	512aa	XP_006560692	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914898	5251	512aa	XP_016770387	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914897	5042	528aa	XP_016770386	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914896	4588	528aa	XP_016770385	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_026443809	3793	512aa	XP_026299594	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914893	3712	505aa	XP_016770382	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A087ZXP4	-
-	XM_016914892	3709	505aa	XP_016770381	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914895	3639	520aa	XP_016770384	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914901	3600	505aa	XP_016770390	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914902	1575	430aa	XP_016770391	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A087ZXP3	-
-	XR_001704774	3846	No protein	-	Nontranslating CDS	-	-
-	XR_001704773	3719	No protein	-	Nontranslating CDS	-	-
-	XR_001704776	3583	No protein	-	Nontranslating CDS	-	-

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Summary

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