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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LOC408411

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Description

transcription factor Sox-2, transcript variant X3

Location

Primary_assembly CM009943.2: 4,189,927-4,280,836 forward strand.

Amel_HAv3.1:CM009943.2

About this gene

This gene has 4 transcripts (splice variants), 47 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_026444696	2666	506aa	XP_026300481	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_026444698	4400	459aa	XP_026300483	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AGS4	-
-	XM_026444697	2566	478aa	XP_026300482	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XR_003305953	2692	No protein	-	Nontranslating CDS	-	-

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Summary

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