Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: XM_396282

Description

cys-loop ligand-gated ion channel, transcript variant X5

Location

About this transcript

This transcript has 9 exons and is annotated with 25 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	XM_006563696	1761	502aa	XP_006563759	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_396282	1756	501aa	XP_396282	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AFN2	-	-
-	XM_006563699	1629	470aa	XP_006563762	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	XM_006563697	1597	470aa	XP_006563760	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	XM_006563702	1593	469aa	XP_006563765	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0GQQ4	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,756 bps, Translation length: 501 residues

Version

XM_396282

Type

Protein coding

Annotation Method

RefSeq gene models from NCBI RefSeq using the GFF3 files available from the NCBI FTP site.