Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: XM_016915610

Description

integrin alpha-PS1, transcript variant X2

Location

About this transcript

This transcript has 19 exons and is annotated with 34 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_625117	3492	1101aa	XP_625120	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088ACX9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_016915610	3549	1043aa	XP_016771099	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016915611	3523	1035aa	XP_016771100	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006565265	3467	1093aa	XP_006565328	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 19, Coding exons: 17, Transcript length: 3,549 bps, Translation length: 1,043 residues

Version

XM_016915610

Type

Protein coding

Annotation Method

RefSeq gene models from NCBI RefSeq using the GFF3 files available from the NCBI FTP site.