Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: XM_001122105

Description

4-coumarate--CoA ligase 1, transcript variant X1

Location

About this transcript

This transcript has 8 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	XM_001122105	1887	547aa	XP_001122105	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088A4S5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_016913258	1757	532aa	XP_016768747	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	XM_016913257	1749	502aa	XP_016768746	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,887 bps, Translation length: 547 residues

Version

XM_001122105

Type

Protein coding

Annotation Method

RefSeq gene models from NCBI RefSeq using the GFF3 files available from the NCBI FTP site.