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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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- Gene history

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DB built by WormBase

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Gene: deb-1 WBGene00000942

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Description

Vinculin [Source:NCBI gene;Acc:177482]

Location

Chromosome IV: 7,085,215-7,094,266 reverse strand.

WBcel235:BX284604.4

About this gene

This gene has 8 transcripts (splice variants), 83 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	ZC477.9d.1	3630	1090aa	ZC477.9d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	-
-	ZC477.9a.1	3506	1010aa	ZC477.9a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	ZC477.9c.1	3472	999aa	ZC477.9c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	-
-	ZC477.9e.1	3240	1079aa	ZC477.9e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	-
-	ZC477.9b.1	1590	369aa	ZC477.9b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	-
-	ZC477.9f.1	1077	358aa	ZC477.9f.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	-
-	ZC477.9h.1	699	232aa	ZC477.9h.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	-
-	ZC477.9g.1	666	221aa	ZC477.9g.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P19826	-	-

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Summary

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