Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
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Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: nab-1 WBGene00003516

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Description

NeurABin [Source:NCBI gene;Acc:172021]

Location

Chromosome I: 4,229,570-4,236,115 forward strand.

WBcel235:BX284601.5

About this gene

This gene has 10 transcripts (splice variants), 63 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C43E11.6c.1	2933	90aa	C43E11.6c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KYW2	-	-
-	C43E11.6a.1	2667	721aa	C43E11.6a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KYW1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	C43E11.6a.2	2575	721aa	C43E11.6a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KYW1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	C43E11.6a.3	2520	721aa	C43E11.6a.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KYW1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	C43E11.6d.1	2476	658aa	C43E11.6d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KYW3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	C43E11.6e.2	2348	527aa	C43E11.6e.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5R3Y6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	C43E11.6b.1	2190	561aa	C43E11.6b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95Q64	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	C43E11.6e.1	2173	527aa	C43E11.6e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5R3Y6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nab-1-210	C43E11.6e.3	2096	527aa	C43E11.6e.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5R3Y6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	C43E11.6b.2	2095	561aa	C43E11.6b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95Q64	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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