Summary
- Splice variants
- Transcript comparison
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Sequence
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- Orthologues
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Pan-taxonomic Compara
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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Genetic Variation
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DB built by WormBase

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Gene: nhr-34 WBGene00003627

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Description

Nuclear hormone receptor family member nhr-34 [Source:NCBI gene;Acc:177800]

Location

Chromosome IV: 9,664,360-9,675,672 reverse strand.

WBcel235:BX284604.4

About this gene

This gene has 5 transcripts (splice variants), 130 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F58G6.5c.2	2285	631aa	F58G6.5c.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21006	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	F58G6.5b.1	2175	613aa	F58G6.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21006	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	F58G6.5c.1	1905	631aa	F58G6.5c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21006	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	F58G6.5a.1	1863	499aa	F58G6.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21006	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	F58G6.5d.1	1692	563aa	F58G6.5d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21006	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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