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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- GO: Biological process
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- GO: Cellular component
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DB built by WormBase

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Gene: nhr-40 WBGene00003630

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Description

Nuclear hormone receptor family member nhr-40 [Source:NCBI gene;Acc:180560]

Location

Chromosome X: 2,594,003-2,606,732 forward strand.

WBcel235:BX284606.5

About this gene

This gene has 2 transcripts (splice variants), 64 orthologues and 189 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	T03G6.2b.1	1857	434aa	T03G6.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q22127	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	T03G6.2c.1	1832	450aa	T03G6.2c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q22127	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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