LIM domain family [Source:NCBI gene;Acc:3565712]
Chromosome I: 9,181,810-9,220,728 reverse strand.
WBcel235:BX284601.5
This gene has 8 transcripts (splice variants) and 109 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| - | F25H5.1i.1 | 3183 | 793aa | F25H5.1i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AQM0 | - | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| - | F25H5.1h.1 | 3095 | 763aa | F25H5.1h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3ATK8 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F25H5.1b.1 | 2855 | 619aa | F25H5.1b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EDJ5 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F25H5.1f.1 | 2783 | 656aa | F25H5.1f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EF39 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F25H5.1c.1 | 2505 | 564aa | F25H5.1c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EEA4 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F25H5.1e.1 | 2322 | 486aa | F25H5.1e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O17833 | - | - |
| - | F25H5.1g.1 | 1329 | 174aa | F25H5.1g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0K3AQP4 | - | - |
| - | F25H5.1d.1 | 873 | 290aa | F25H5.1d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q3S1I9 | - | - |
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