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DB built by WormBase

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Gene: unc-10 WBGene00006750

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Description

Rab-3-interacting molecule unc-10 [Source:NCBI gene;Acc:180990]

Location

Chromosome X: 7,272,317-7,280,322 reverse strand.

WBcel235:BX284606.5

About this gene

This gene has 6 transcripts (splice variants) and 88 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	T10A3.1a.1	4940	1563aa	T10A3.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q22366	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	T10A3.1b.1	4862	1371aa	T10A3.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q22366	-	-
-	T10A3.1c.1	4821	1529aa	T10A3.1c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5E4LYK9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	T10A3.1d.1	4584	1527aa	T10A3.1d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5E4LWH4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	T10A3.1e.1	4502	1424aa	T10A3.1e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5E4LXW2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	T10A3.1f.1	4269	1422aa	T10A3.1f.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5E4M2M0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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