Summary
- Splice variants
- Transcript comparison
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Pan-taxonomic Compara
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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DB built by WormBase

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Gene: B0001.8 WBGene00007093

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Description

Uncharacterized protein [Source:NCBI gene;Acc:178161]

Location

Chromosome IV: 12,138,844-12,141,059 reverse strand.

WBcel235:BX284604.4

About this gene

This gene has 7 transcripts (splice variants) and 4 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	B0001.8d.3	2028	309aa	B0001.8d.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P6NIB1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	B0001.8d.4	1867	309aa	B0001.8d.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P6NIB1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	B0001.8d.2	1711	309aa	B0001.8d.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P6NIB1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	B0001.8d.1	1709	309aa	B0001.8d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3P6NIB1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	B0001.8b.1	1669	492aa	B0001.8b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K8ESC8	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	B0001.8a.1	1658	490aa	B0001.8a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8WQH2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	B0001.8c.1	216	71aa	B0001.8c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3ARG5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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