Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Metazoan Compara
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- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
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Molecular interactions
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External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: Y2H9A.4 WBGene00012381

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Description

Uncharacterized protein [Source:NCBI gene;Acc:189352]

Location

Chromosome V: 13,445,899-13,448,815 forward strand.

WBcel235:BX284605.5

About this gene

This gene has 5 transcripts (splice variants), 2 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y2H9A.4b.1	1878	625aa	Y2H9A.4b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H8ESD3	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	Y2H9A.4a.1	1803	600aa	Y2H9A.4a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EFR4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y2H9A.4e.1	1803	600aa	Y2H9A.4e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AUJ3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y2H9A.4c.1	1794	597aa	Y2H9A.4c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H8ESD2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y2H9A.4d.1	1794	597aa	Y2H9A.4d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AS51	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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