Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Metazoan Compara
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- Gene tree (Insects)
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- Orthologues
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Pan-taxonomic Compara
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- GO: Cellular component
- GO: Biological process
- GO: Molecular function
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Genetic Variation
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DB built by WormBase

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Gene: ZC455.1 WBGene00013902

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Description

Uncharacterized protein [Source:NCBI gene;Acc:179751]

Location

Chromosome V: 12,773,522-12,783,066 forward strand.

WBcel235:BX284605.5

About this gene

This gene has 7 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	ZC455.1b.1	2782	828aa	ZC455.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EEA0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	ZC455.1b.2	2668	828aa	ZC455.1b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EEA0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	ZC455.1c.1	2661	886aa	ZC455.1c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EEL6	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	ZC455.1f.1	2594	802aa	ZC455.1f.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EGE1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	ZC455.1e.1	2583	860aa	ZC455.1e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EGE4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	ZC455.1a.1	2207	665aa	ZC455.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2D6M8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	ZC455.1d.1	2004	667aa	ZC455.1d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3MU23	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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