Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by WormBase

.

Gene: rpa-4 WBGene00019079

.

Description

RPA_C domain-containing protein [Source:NCBI gene;Acc:186576]

Location

Chromosome I: 5,509,467-5,511,705 reverse strand.

WBcel235:BX284601.5

About this gene

This gene has 9 transcripts (splice variants), 20 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F59A3.6a.2	1759	293aa	F59A3.6a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P91356	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	F59A3.6a.1	1698	293aa	F59A3.6a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P91356	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	F59A3.6a.3	1559	293aa	F59A3.6a.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P91356	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	F59A3.6a.4	1246	293aa	F59A3.6a.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P91356	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	F59A3.6e.1	616	170aa	F59A3.6e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I7G2	-	-
-	F59A3.6c.1	513	170aa	F59A3.6c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I7G2	-	-
-	F59A3.6d.1	336	111aa	F59A3.6d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AU77	-	-
-	F59A3.6f.1	336	111aa	F59A3.6f.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0K3AU77	-	-
-	F59A3.6b	1572	No protein	-	A non-coding gene.ncRNA	-	-	-

.

Summary

.

.