Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
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Molecular interactions
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External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: ifg-1 WBGene00002066

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Description

MIF4G domain-containing protein [Source:NCBI gene;Acc:174322]

Location

Chromosome II: 8,217,222-8,222,396 forward strand.

WBcel235:BX284602.5

About this gene

This gene has 5 transcripts (splice variants) and 95 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	M110.4c.1	4664	1042aa	M110.4c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5BM23	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	M110.4d.1	4661	1159aa	M110.4d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5BM24	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	M110.4b.1	4644	1155aa	M110.4b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JMF0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	M110.4a.1	4517	1156aa	M110.4a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21531	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	M110.4e.1	3483	1160aa	M110.4e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A486WX07	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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