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DB built by WormBase

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Gene: npa-1 WBGene00003786

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Description

Nematode Polyprotein Allergen related [Source:NCBI gene;Acc:179095]

Location

Chromosome V: 7,075,787-7,081,580 forward strand.

WBcel235:BX284605.5

About this gene

This gene has 9 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	VC5.3a.1	4533	1440aa	VC5.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EF32	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	VC5.3b.1	4631	399aa	VC5.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86S16	-	-
-	VC5.3b.2	4432	399aa	VC5.3b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86S16	-	-
-	VC5.3b.5	4404	399aa	VC5.3b.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86S16	-	-
-	VC5.3b.4	4365	399aa	VC5.3b.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86S16	-	-
-	VC5.3b.3	4348	399aa	VC5.3b.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86S16	-	-
-	VC5.3b.7	4336	399aa	VC5.3b.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86S16	-	-
-	VC5.3b.6	4315	399aa	VC5.3b.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86S16	-	-
-	VC5.3b.8	1755	399aa	VC5.3b.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86S16	-	-

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Summary

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