Description
Patterned Expression Site [Source:NCBI gene;Acc:174819]
Location
Chromosome II: 11,827,930-11,830,020 reverse strand.
WBcel235:BX284602.5
About this gene
This gene has 3 transcripts (splice variants) and 2 paralogues.
Transcripts
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Patterned Expression Site [Source:NCBI gene;Acc:174819]
Chromosome II: 11,827,930-11,830,020 reverse strand.
WBcel235:BX284602.5
This gene has 3 transcripts (splice variants) and 2 paralogues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
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- | T27D12.4a.1 | 1541 | 476aa | T27D12.4a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EGM7 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
- | T27D12.4c.1 | 1442 | 312aa | T27D12.4c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F9UKU6 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
- | T27D12.4b.1 | 1293 | 430aa | T27D12.4b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G5EEB7 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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Ensembl Metazoa release 58 - January 2024 © EMBL-EBI EMBL-EBI
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