Mediator of RNA polymerase II transcription subunit 17 [Source:NCBI gene;Acc:180325]
Chromosome V: 20,250,806-20,267,247 reverse strand.
WBcel235:BX284605.5
This gene has 4 transcripts (splice variants) and 73 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| - | Y113G7B.18b.1 | 3182 | 667aa | Y113G7B.18b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9NAL4 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| - | Y113G7B.18a.2 | 3168 | 664aa | Y113G7B.18a.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9NAL4 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | Y113G7B.18b.2 | 2225 | 667aa | Y113G7B.18b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9NAL4 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| - | Y113G7B.18a.1 | 2216 | 664aa | Y113G7B.18a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9NAL4 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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