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DB built by WormBase

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Gene: swsn-7 WBGene00007433

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Description

SWI/SNF nucleosome remodeling complex component [Source:NCBI gene;Acc:174286]

Location

Chromosome II: 8,022,632-8,027,763 reverse strand.

WBcel235:BX284602.5

About this gene

This gene has 2 transcripts (splice variants) and 82 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C08B11.3a.1	4384	1244aa	C08B11.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q09441	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	C08B11.3b.1	4268	1201aa	C08B11.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K5ATP7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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