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DB built by WormBase

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Gene: C27A7.5 WBGene00007756

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Description

ANK_REP_REGION domain-containing protein; Asparaginase [Source:NCBI gene;Acc:179667]

Location

Chromosome V: 12,154,867-12,162,320 reverse strand.

WBcel235:BX284605.5

About this gene

This gene has 5 transcripts (splice variants) and 117 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C27A7.5c.1	2318	715aa	C27A7.5c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9U3P0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	C27A7.5d.1	2360	647aa	C27A7.5d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5Z2U5	-	-
-	C27A7.5a.1	2325	713aa	C27A7.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P90758	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	C27A7.5e.1	2294	684aa	C27A7.5e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5Z2U6	-	-
-	C27A7.5b.1	327	108aa	C27A7.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P90759	-	-

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Summary

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