Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene tree (Metazoa)
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- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
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External references
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ID History
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DB built by WormBase

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Gene: ssu-2 WBGene00013455

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Description

Suppressor of Stomatin mutant Uncoordination [Source:NCBI gene;Acc:178379]

Location

Chromosome IV: 14,361,247-14,368,322 forward strand.

WBcel235:BX284604.4

About this gene

This gene has 4 transcripts (splice variants) and 60 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y67A10A.6d.1	1431	397aa	Y67A10A.6d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061ADP1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y67A10A.6b.1	1366	402aa	Y67A10A.6b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H1UBK3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	Y67A10A.6a.1	1282	402aa	Y67A10A.6a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H1UBK5	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	Y67A10A.6c.1	1271	397aa	Y67A10A.6c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H1UBK4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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