Ricin B-type lectin domain-containing protein [Source:NCBI gene;Acc:173962]
Chromosome II: 5,669,771-5,689,040 reverse strand.
WBcel235:BX284602.5
This gene has 4 transcripts (splice variants), 84 orthologues and 1 paralogue.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| - | C25H3.11a.1 | 10414 | 3314aa | C25H3.11a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2K5ATR5 | - | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| - | C25H3.11c.1 | 10392 | 3304aa | C25H3.11c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2K5ATQ8 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C25H3.11d.1 | 10380 | 3302aa | C25H3.11d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2K5ATR9 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C25H3.11b.1 | 10329 | 3312aa | C25H3.11b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2K5ATQ3 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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