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DB built by WormBase

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Gene: noah-1 WBGene00016422

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Description

uncharacterized protein [Source:NCBI gene;Acc:172261]

Location

Chromosome I: 5,874,416-5,878,958 reverse strand.

WBcel235:BX284601.5

About this gene

This gene has 3 transcripts (splice variants), 205 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	C34G6.6c.1	3784	1052aa	C34G6.6c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H8W3Y1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	C34G6.6b.1	3775	1052aa	C34G6.6b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T3B7	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
-	C34G6.6a.1	3762	1048aa	C34G6.6a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KZ73	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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