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DB built by WormBase

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Gene: ucr-1 WBGene00018963

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Description

Cytochrome b-c1 complex subunit 1, mitochondrial; Peptidase_M16_C domain-containing protein [Source:NCBI gene;Acc:175772]

Location

Chromosome III: 5,592,135-5,594,401 forward strand.

WBcel235:BX284603.4

About this gene

This gene has 4 transcripts (splice variants), 243 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F56D2.1c.1	1616	473aa	F56D2.1c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2C9C3L5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	F56D2.1a.1	1709	471aa	F56D2.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P98080	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	F56D2.1d.1	897	298aa	F56D2.1d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2C9C3F6	-	-
-	F56D2.1b.1	891	296aa	F56D2.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2C9C366	-	-

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Summary

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