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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: Y4C6B.2 WBGene00021156

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Description

Aa_trans domain-containing protein [Source:NCBI gene;Acc:189355]

Location

Chromosome IV: 5,339,574-5,344,206 forward strand.

WBcel235:BX284604.4

About this gene

This gene has 9 transcripts (splice variants), 13 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Y4C6B.2a.2	1647	484aa	Y4C6B.2a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9UAZ9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	Y4C6B.2b.6	2408	176aa	Y4C6B.2b.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZG4	-	-
-	Y4C6B.2b.3	2354	176aa	Y4C6B.2b.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZG4	-	-
-	Y4C6B.2b.1	1759	176aa	Y4C6B.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZG4	-	-
-	Y4C6B.2b.5	1702	176aa	Y4C6B.2b.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZG4	-	-
-	Y4C6B.2b.2	1631	176aa	Y4C6B.2b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZG4	-	-
-	Y4C6B.2a.1	1596	484aa	Y4C6B.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9UAZ9	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	Y4C6B.2b.4	1547	176aa	Y4C6B.2b.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZG4	-	-
-	Y4C6B.2b.7	1524	176aa	Y4C6B.2b.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YZG4	-	-

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Summary

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